galaxy-mcp

MCP server for Galaxy bioinformatics platform - connect, execute tools, and manage workflows

stdio v1.3.0
GitHub

Connection Configuration

Add this to your AI agent's MCP config file to connect.

Run in your terminal:

claude mcp add io.github.galaxyproject--galaxy-mcp -- uvx

Server Details

Transport

stdio

Authentication

None

Version

v1.3.0

Server Name

io.github.galaxyproject/galaxy-mcp

Last Updated

Jan 29, 2026

Get Started

How to install and connect this MCP server.

Required Configuration

Environment variables you must provide when running this server.
Variable Required
GALAXY_URL Yes
GALAXY_API_KEY secret Yes